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Original file line number Diff line number Diff line change
Expand Up @@ -3,149 +3,33 @@
"places_resolved": "",
"main_place_dcid": "<None>",
"main_place_name": "<None>",
"entities_detected": [
"volvox"
],
"entities_resolved": "(name: Volvox, dcid: bio/D044446); (name: Volvox, dcid: bio/Volvox); ",
"query_with_places_removed": "what is the phylum of",
"entities_detected": [],
"entities_resolved": "",
"query_with_places_removed": "",
"sv_matching": {
"CosineScore": [
0.35511,
0.34609,
0.34526,
0.34485,
0.34114,
0.3385,
0.33499,
0.33166,
0.32601,
0.32424,
0.32061,
0.31427,
0.31277,
0.31263,
0.3125,
0.31177,
0.31034,
0.31007,
0.30988,
0.30805,
0.30746,
0.3072,
0.30394
],
"CosineScore": [],
"MultiSV": {},
"Query": "what is the phylum of",
"SV": [
"dc/topic/SDGBiodiversity",
"Count_Person_5OrMoreYears_OtherIndicLanguagesSpokenAtHome",
"Annual_Amount_Emissions_Phenol_SCC_28_MiscellaneousAreaSources",
"Annual_Amount_Emissions_Phenol_SCC_3_IndustrialProcesses",
"Annual_Amount_Emissions_Phenol_SCC_26_WasteDisposalTreatmentAndRecovery",
"Count_Person_5OrMoreYears_GreekSpokenAtHome",
"Annual_Amount_Emissions_Phenol_SCC_23_IndustrialProcesses",
"Amount_FarmInventory_SorghumForSilageOrGreenchop",
"Count_Person_5OrMoreYears_PersianInclFarsiDariSpokenAtHome",
"Count_Person_SpeakEnglishLessThanVeryWell_5OrMoreYears_PersianSpokenAtHome",
"Count_Farm_SorghumForSilageOrGreenchop",
"Annual_Amount_Emissions_Phenol_SCC_22_MobileSources",
"Count_Person_SpeakEnglishLessThanVeryWell_5OrMoreYears_PersianInclFarsiDariSpokenAtHome",
"Amount_FarmInventory_BarleyForGrain",
"Count_Person_5OrMoreYears_OtherAndUnspecifiedLanguagesSpokenAtHome",
"Count_Person_5OrMoreYears_MalayalamKannadaOrOtherDravidianLanguagesSpokenAtHome",
"Amount_FarmInventory_DurumWheatForGrain",
"Count_Person_SpeakEnglishVeryWell_5OrMoreYears_PersianInclFarsiDariSpokenAtHome",
"Count_Person_SpeakEnglishVeryWell_5OrMoreYears_MalayalamKannadaOrOtherDravidianLanguagesSpokenAtHome",
"Count_Person_SpeakEnglishVeryWell_5OrMoreYears_GreekSpokenAtHome",
"Annual_Amount_Emissions_Phenol_SCC_2_InternalCombustionEngines",
"Amount_FarmInventory_CornForSilageOrGreenchop",
"Count_Person_5OrMoreYears_OtherSlavicLanguagesSpokenAtHome"
]
"Query": "What is the phylum of volvox?",
"SV": []
},
"props_matching": {
"CosineScore": [
1.0,
0.47528,
0.36154,
0.34543,
0.34543,
0.34201,
0.32933,
0.31845,
0.31467,
0.3084,
0.30794,
0.28188,
0.27151,
0.27072,
0.2599,
0.2599,
0.24828,
0.24735,
0.24662,
0.24616,
0.23899,
0.23136,
0.23029,
0.22962,
0.22774,
0.22173,
0.21856,
0.21693
],
"PROP": [
"phylum",
"chemblID",
"geneID",
"<-compoundID{typeOf:ChemicalCompoundGeneticVariantAssociation}->variantID",
"<-variantID{typeOf:ChemicalCompoundGeneticVariantAssociation}->compoundID",
"virusGenus",
"typeOfGene",
"fullName",
"ensemblID",
"simplifiedMolecularInputLineEntrySystem",
"geneticVariantFunctionalCategory",
"chromosomeSize",
"virusHost",
"strandOrientation",
"<-geneID{typeOf:GeneGeneticVariantAssociation}->variantID",
"<-variantID{typeOf:GeneGeneticVariantAssociation}->geneID",
"ncbiProteinAccessionNumber",
"hgncID",
"alleleType",
"ofVirusSpecies",
"hasGenomicCoordinates",
"ncbiTaxId",
"umlsConceptUniqueID",
"antigenType",
"alleleOrigin",
"<-diseaseID{typeOf:DiseaseGeneAssociation}->geneID",
"antibodyType",
"inChIKey"
]
"CosineScore": [],
"PROP": []
},
"query_detection_debug_logs": {
"dc_recognize_entities": {
"volvox": [
"bio/D044446",
"bio/Volvox"
]
},
"dc_recognize_entities": {},
"dc_recognize_places": {},
"llm_response": {},
"main_place_inferred": null,
"original_query": "What is the phylum of volvox",
"place_dcid_inference": "Place DCID Inference did not trigger (no place strings found).",
"place_resolution": "Place resolution did not trigger (no place dcids found).",
"places_found_str": [],
"query_transformations": {
"place_detection_input": "What is the phylum of volvox",
"place_detection_with_places_removed": "what is the phylum of",
"sv_detection_query_index_types": [
"medium_ft",
"bio_ft"
],
"sv_detection_query_input": "what is the phylum of",
"sv_detection_query_stop_words_removal": "phylum"
]
}
}
}

Large diffs are not rendered by default.

Original file line number Diff line number Diff line change
@@ -1,16 +1,6 @@
{
"childEntityType": "State",
"classifications": [
{
"quantity": {
"idx": 0,
"qval": {
"cmp": "GE",
"val": 2.2250738585072014e-308
}
},
"type": 3
},
Comment on lines -4 to -13
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@shixiao-coder is this the change you said should be reverted? I'm a little confused because the value is effectively 0 anyway.

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yes, we can revert this. I believe the diff is text diff instead of value diff and causing this to show up in the failure

{
"ranking_type": [
1
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -106,6 +106,13 @@
],
"peerPlaces": [],
"peerTopics": [
{
"dcid": "dc/topic/EconomicActivity",
"name": "Economic Activity",
"types": [
"Topic"
]
},
{
"dcid": "dc/topic/GlobalEconomicActivity",
"name": "Global Economic Activity",
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -377,23 +377,23 @@
{
"tiles": [
{
"placeDcidOverride": "country/RWA",
"placeDcidOverride": "country/ETH",
"statVarKey": [
"Amount_EconomicActivity_GrossDomesticProduction_Nominal_growth_pc"
],
"title": "Rwanda",
"title": "Ethiopia",
"type": "LINE"
}
]
},
{
"tiles": [
{
"placeDcidOverride": "country/ETH",
"placeDcidOverride": "country/RWA",
"statVarKey": [
"Amount_EconomicActivity_GrossDomesticProduction_Nominal_growth_pc"
],
"title": "Ethiopia",
"title": "Rwanda",
"type": "LINE"
}
]
Expand Down
Original file line number Diff line number Diff line change
@@ -1,68 +1,15 @@
{
"client": "test_detect-and-fulfill",
"config": {
"categories": [
{
"blocks": [
{
"columns": [
{
"tiles": [
{
"answerTableTileSpec": {
"columns": [
{
"header": "Has Genomic Coordinates",
"propertyExpr": "->hasGenomicCoordinates"
}
]
},
"entities": [
"bio/ncbi_109457387",
"bio/ncbi_421941"
],
"title": "The Has Genomic Coordinates for PQLC3 are as follows:",
"type": "ANSWER_TABLE"
}
]
}
]
}
]
}
]
},
"config": {},
"context": {},
"debug": {},
"entities": [
{
"dcid": "bio/ncbi_109457387",
"name": "PQLC3",
"type": ""
},
{
"dcid": "bio/ncbi_421941",
"name": "PQLC3",
"type": ""
}
],
"pastSourceContext": "",
"place": {},
"placeFallback": {},
"placeSource": "UNKNOWN",
"places": [],
"relatedThings": {
"childPlaces": {},
"childTopics": [],
"exploreMore": {},
"mainTopics": [],
"parentPlaces": [],
"parentTopics": [],
"peerPlaces": [],
"peerTopics": []
"failure": "Sorry, could not complete your request. No entity found in the query.",
"place": {
"dcid": "",
"name": "",
"place_type": ""
},
"svSource": "UNKNOWN",
"userMessages": [
"See relevant information based on the previous query."
"Sorry, could not complete your request. No entity found in the query."
]
}
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